After upgrading domain mapping plugin wp-admin shows subdirectory in url path

I created a site at and mapped a domain to it I have updated the permalinks in everyway possible but when I login to I intermittently get part of the original url in the path. For example when I click on plugins in my admin I get

I need to fix the domain mapping asap because it is not working with woo commerce and now I can not activate buddy press.

I have enabled staff login via the dashboard for you to login.

Thank you very much!

Please advise,