Batch Create

When I import a spreadsheet of users with batch create, the sites created are in the wrong directory and I get an error message saying ‘no input file specified’. Forinstance the main site on which I have multisite installed in http://www.wordpress-workshops.net/wordpress when I use batch create it creates the site, example http://www.wordpress-workshops.net/test1 but misses out the ‘wordpress’ directory. When create sites via the add site function in WP, everything is fine. Please help ASAP because its driving me mad!!!!! Please – Regards Paul