Can the Cloner plugin be used in a non-multisite environment

This might be a unique use case. But I am trying to clone a non-multisite instance of Wordpress. This I would like to use as a master template for other sites with similar parameters. I can use Multisite, but having a shared database, and code base is not always great for many reasons. If something goes wrong somewhere on a site, it is isolated, that is the main reason.

So the question remains, can the Cloner plugin be used on a standard WP instance? What other tools, or plugins are there to migrate a site including its database, and then migrate that into a new WP instance, into a new database. That is what I am trying to achieve. Thanks.