Multisite content copier does not copy embeded videos

I've just started using the multisite content copier and I am having 2 problems:
1. Embedded video code is not copying over. Most of our pages include a short video so this is a big problem for us.
2. My theme uses custom post types for home page items. I would like to be able to use the multisite content copier to update content from these custom post types but they do not show up in list to copy. I also have a plugin that creates custom post types and the custom post types are also not being shown in list to be able to copy.