New Blog Templates :: Clone Site

Hi
We're setting up a Multisite that allows someone to make a purchase. Upon payment being received, it creates a copy of the site to a sub-domain.

However, the copied site isn't copying everything over.

We use Gravity Forms to take the payment and create the sub-domain
Then we have Domain Mapper and new Blog Templates installed.
We have a site (master) which has all the settings in place (including WooCommerce installed).

Everything is fine and works but the newly created site just doesn't contain everything from the master site.

Any help is much appreciated

Thanks,
Ian