Our wordpress was installed through the bluehost control panel, is that a problem?

We are developing a website based on multisite wordpress and we installed wordpress from the bluehost control panel by clicking on the wordpress icon and following the instructions. I think it's what they refer to as a 1-click installation using simplescripts.

We're now planning to add buddypress but we're a bit worried by this in the buddypress codex "WordPress should be installed manually i.e. via FTP, cpanel, etc. and NOT via webhost scripts (fantastico, softalicious, etc.)which bring about numerous issues when BuddyPress is activated." Should we go ahead with installing the buddypress plugin or is it likely to cause probems?

Thanks for your help.