Template Plugin Not Working Properly

I have installed Version 2.7.8 on my WP MultiSite Install, however I now it does not seem to work properly. When I create a new site, using a template that I setup with your plugin, the result is generic. None of the pages, plugins, themes, menus etc are applied to the new site.

Is there something I am missing from the Plugin setup that is preventing the templates that I am creating to be installed correctly on my new sites?