I'm trying out the free trial to decide if I want to make the transition to WPMU Dev or not, but so far it's not looking good. When I try to setup ultimate branding, most of the options you have shown in the "usage" are not available. For example:
Custom Admin Bar, most options you have pictured don't exist. The entry title, title link, config links..... etc don't exist. Yes I have the "enable custom entry" set to yes.
Custom Help Content, I've adding in some stuff but this shows up nowhere in the admin area.
This is the first plugin I've messed with so far, but I'm not sure I want to go any further as I'm not really pleased. I've found that setting this up is almost as time consuming as some themes are.