Updated buddypress daily, child theme modifications broke

So I updated today and all my modifications are gone. Well, not gone, using firefox they appear to be over wrote by a stylesheet coming from just my domain name. I don't understand this. Is this inline CSS? Where is it coming from, how do I get rid of it?

Also in firebug I can see it says #2 inline, is adding css to my theme.

Also, now that I updated to 4.1 my child theme still says 3.9.9.2. Is this OK?